CDS

Accession Number TCMCG007C02439
gbkey CDS
Protein Id XP_009120794.1
Location 14626822..14628375
Gene LOC103845662
GeneID 103845662
Organism Brassica rapa

Protein

Length 517aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009122546.3
Definition ribosomal RNA processing protein 1 homolog [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category A
Description Has 543 Blast hits to 530 proteins in 201 species Archae - 0
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14849        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000785        [VIEW IN EMBL-EBI]
GO:0000791        [VIEW IN EMBL-EBI]
GO:0000792        [VIEW IN EMBL-EBI]
GO:0001652        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003712        [VIEW IN EMBL-EBI]
GO:0003713        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009615        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010563        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010921        [VIEW IN EMBL-EBI]
GO:0010923        [VIEW IN EMBL-EBI]
GO:0010941        [VIEW IN EMBL-EBI]
GO:0010942        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019220        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0030687        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034260        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0035303        [VIEW IN EMBL-EBI]
GO:0035305        [VIEW IN EMBL-EBI]
GO:0035821        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042981        [VIEW IN EMBL-EBI]
GO:0043065        [VIEW IN EMBL-EBI]
GO:0043067        [VIEW IN EMBL-EBI]
GO:0043068        [VIEW IN EMBL-EBI]
GO:0043086        [VIEW IN EMBL-EBI]
GO:0043087        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043484        [VIEW IN EMBL-EBI]
GO:0043900        [VIEW IN EMBL-EBI]
GO:0043902        [VIEW IN EMBL-EBI]
GO:0043903        [VIEW IN EMBL-EBI]
GO:0043921        [VIEW IN EMBL-EBI]
GO:0043923        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044092        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044403        [VIEW IN EMBL-EBI]
GO:0044419        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0045936        [VIEW IN EMBL-EBI]
GO:0045944        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046782        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048524        [VIEW IN EMBL-EBI]
GO:0050434        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050792        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051174        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051336        [VIEW IN EMBL-EBI]
GO:0051346        [VIEW IN EMBL-EBI]
GO:0051702        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051817        [VIEW IN EMBL-EBI]
GO:0051851        [VIEW IN EMBL-EBI]
GO:0052312        [VIEW IN EMBL-EBI]
GO:0052472        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0098586        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTGAAACGGAAGCAACTCTCCGAGGCGCAACAATCACCTCCCGTCGAAGAAAACTGCAAATCCCTGATAAAGAAGCTCGCCTCCTGCAAGCAAACCATCCGCGACCGCTCCTTACGAACCCTCCTCCTCACATGGCTCCCCGAGCAAGCCTCAATCCCCGACGAGGACATGAAGAAGCTCTGGCAAGGCATCTTCTACTGCATGTGGCACGCGGACAAGTCCCTCTACCAGTCGGAGCTCATCGACCGCCTCGCCGCCGCTCTGCACTCCCTCCCTCTCCCTCTCTCGGTCCACTACTTCACCGTCTTCCTGTTCACCATGCGCCGCGAGTGGTCCCGCATCGATCGCCTGAGGTTGGACAAGTTCTACCTCTTAATCCGCAGGTTCTTGCACGCGCTGTTGGCTCTGATGGACGGGAGCTCGTGGGATTTGGAGCTGACGAGGAGGTTGATGGGTGTTTTGTTCGATGGGACGTTTCTTGCTGGGGATAAGTTTCAGGGGAATGGGGTTAACTATCATGTGGCGTCTGTTTTCGTTGAGGAGGTTAGGGAGTTTCTTCCGTTGAGGAAGGAGGTTTTGGAGCTTGTGTTTGGGCCTTTTGTGATGGTTTTGGGGGTTGTTAGTGATAAGGTTTTGGTTGGGAAGATTAAGAGTAATTTGTTTGATGAGTTGCTTAGGATGGGGAGGAGGCTGTTGGATGTTAAGAAGGGTGGGGATGAGGGAGTGGGTGAGGATGATGATGTGGTTGTTTTGGGATCTATTGGGTTGTCTATGGGGTTTGGGAAGAGGTTTTATGAGATGGGTTCTTCTCCTGATTGCTGTCAGGGGAATAGGAAAGTGATTTTTGCTCTTCATAAAGAGTTTTTGCAGTTGGAGAAGGATATGTTGAGTTCTGGTGTTGAGGTTTCGATTACTGAAGCTACTCGGGAAGAGGAAGTGCCTGAGCTGGTTCCTATCACTGTTGAGACGGAAGCAGGAGTGCCTGAGACTAATAAGAATGTTGCAAATGGGTCTTCTTCTAAGAAGAAGAAGAAGAGTAGTTTGAAGAAATGTTCAAAGTCTAAAAAGGACAGTGACAAGAAGGATGAAGACGAGTCTGTTGACGAGACTATGATATCGGATCTCAGAGAGGAGTTTGAGAAGATTGCGTCCGAGATGGGACCAGTGAGAGATGAGGTTGCGAGTGTCTGCGAAGAAGCAGAACCTGTTCCAGTAGCCAAAAAGAACAAGAAGAGGAAAAGAGAGAACAAAGGTGTTGTTGTAGAGCAAGGTGCTACTGTTAACAGAGATGCAGCAGAGACGAGCTTACCAGGCCCGAGCAGTGAGAAGAGCTCAAAGAGAGTAAGATTCGCAATGAAGAACAATCTGGTGTGGAAGCCTCACTGCCCTTTACCTCCACAGGACTTGAGGTTGCCTCCGTCTGCTACACCGAGAGGAAGTGCTCTGAAGAAAGGGATCCCAGCCGGTCCAGTGAGGGAGTCTCCCAGTAGGAAGACGAAGAAGAAAGTGAAACCCAACAAACGTAAAGGAGTGAAGACAATCAAGAAGTAA
Protein:  
MVKRKQLSEAQQSPPVEENCKSLIKKLASCKQTIRDRSLRTLLLTWLPEQASIPDEDMKKLWQGIFYCMWHADKSLYQSELIDRLAAALHSLPLPLSVHYFTVFLFTMRREWSRIDRLRLDKFYLLIRRFLHALLALMDGSSWDLELTRRLMGVLFDGTFLAGDKFQGNGVNYHVASVFVEEVREFLPLRKEVLELVFGPFVMVLGVVSDKVLVGKIKSNLFDELLRMGRRLLDVKKGGDEGVGEDDDVVVLGSIGLSMGFGKRFYEMGSSPDCCQGNRKVIFALHKEFLQLEKDMLSSGVEVSITEATREEEVPELVPITVETEAGVPETNKNVANGSSSKKKKKSSLKKCSKSKKDSDKKDEDESVDETMISDLREEFEKIASEMGPVRDEVASVCEEAEPVPVAKKNKKRKRENKGVVVEQGATVNRDAAETSLPGPSSEKSSKRVRFAMKNNLVWKPHCPLPPQDLRLPPSATPRGSALKKGIPAGPVRESPSRKTKKKVKPNKRKGVKTIKK